STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05230.1KEGG: ava:Ava_3135 2.2e-99 hypothetical protein. (558 aa)    
Predicted Functional Partners:
EKF02271.1
Type I secretion target GGXGXDXXX repeat-containing domain protein; KEGG: ava:Ava_0365 2.0e-68 peptidase S8 and S53, subtilisin, kexin, sedolisin K08651; Psort location: Extracellular, score: 10.00; Belongs to the peptidase S8 family.
   
 0.801
EKF03708.1
KEGG: bcg:BCG9842_B4399 3.8e-33 csaB; polysaccharide pyruvyl transferase CsaB.
  
     0.759
EKE96593.1
Transcriptional regulator; KEGG: spo:SPCC364.07 0.14 D-3 phosphoglycerate dehydrogenase (predicted) K00058; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.713
EKF04612.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 2.1e-13 sulfate/thiosulfate import ATP-binding protein CysA 2 (sulfate-transporting ATPase 2).
  
 
  0.696
EKF02490.1
Hypothetical protein; KEGG: ckl:CKL_1473 0.40 kdpC; potassium-transporting ATPase subunit C K01548.
  
     0.690
EKE99077.1
LytR family transcriptional regulator; KEGG: ana:all0844 0.47 peptidyl-tRNA hydrolase K01056; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.663
EKF05568.1
Hypothetical protein; KEGG: edi:EDI_048910 2.4e-16 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 9.97.
  
 
   0.658
EKF01014.1
TonB-dependent receptor plug domain protein; KEGG: sfu:Sfum_2744 7.5e-11 TonB-dependent receptor; K01802 peptidylprolyl isomerase; Psort location: OuterMembrane, score: 10.00.
    
  0.656
EKE99868.1
KEGG: cya:CYA_2262 5.9e-11 protein kinase; K00870 protein kinase.
  
     0.630
EKF02487.1
Hypothetical protein; KEGG: bpt:Bpet1600 0.97 putative oxidoreductase K00019.
   
 
 0.622
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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