STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05252.1Ribonuclease BN; KEGG: rop:ROP_32170 1.6e-32 putative ribonuclease K07058. (258 aa)    
Predicted Functional Partners:
EKF05255.1
KEGG: npu:Npun_F3682 1.5e-134 alpha/beta hydrolase fold protein.
 
     0.629
EKF03185.1
Calcium/proton exchanger; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.
  
    0.624
EKF05254.1
Hypothetical protein; KEGG: kra:Krad_3645 0.56 adenosine deaminase.
       0.607
EKF03477.1
Putative amidinotransferase; KEGG: hma:rrnAC0132 2.7e-87 lysine-ketoglutarate reductase/saccharopine dehydrogenase K00293; Psort location: Cytoplasmic, score: 8.96.
   
    0.578
EKF05251.1
Hypothetical protein; KEGG: ava:Ava_0501 0.27 histidine kinase K00936.
       0.572
EKF05253.1
Hypothetical protein; KEGG: slo:Shew_3132 0.40 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950.
       0.572
EKF05250.1
Hypothetical protein; KEGG: edi:EDI_145240 0.0071 hyaluronan mediated motility receptor.
       0.503
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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