STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05257.1Hypothetical protein; KEGG: pzu:PHZ_c0875 0.22 serB; phosphoserine phosphatase; K01079 phosphoserine phosphatase. (52 aa)    
Predicted Functional Partners:
EKF03236.1
Putative helicase; KEGG: hsl:OE8016F 8.1e-51 ATP-dependent helicase; Psort location: Cytoplasmic, score: 8.96.
   
  0.862
EKF01001.1
Hypothetical protein; KEGG: cgt:cgR_1633 0.080 phosphoenolpyruvate carboxylase K01595.
   
  0.862
EKF05258.1
Hypothetical protein; KEGG: mtp:Mthe_1210 0.24 putative transcriptional regulator; K03655 ATP-dependent DNA helicase RecG.
       0.773
rtcA
RNA 3'-terminal-phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing.
  
  
 0.757
EKF05655.1
Superfamily II DNA/RNA helicase; KEGG: rer:RER_40940 3.7e-97 deaD; ATP-dependent RNA helicase DeaD K05592; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family.
   
  0.737
EKE97292.1
Helicase; KEGG: mmw:Mmwyl1_2519 0.00051 ATP-dependent helicase HrpA; K03578 ATP-dependent helicase HrpA.
   
  0.737
EKF01304.1
Helicase; KEGG: lsp:Bsph_0793 1.9e-08 ATP-dependent helicase YqhH; Psort location: Cytoplasmic, score: 8.96.
   
  0.737
EKF05256.1
Hypothetical protein.
       0.536
EKE97881.1
DNA methyltransferase; KEGG: cju:C8J_1452 0.0067 hsdM; type I restriction-modification system, M subunit K03427; Psort location: Cytoplasmic, score: 8.96.
     
  0.509
rsmA
rRNA adenine dimethylase KsgA; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
     
  0.509
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.