STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05261.1FAD dependent oxidoreductase; KEGG: cyn:Cyan7425_1174 3.4e-222 All-trans-retinol 13,14-reductase. (520 aa)    
Predicted Functional Partners:
EKF01324.1
Magnesium chelatase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
  
 0.622
EKE97546.1
Putative squalene/phytoene synthase; KEGG: ana:alr1805 5.4e-128 hypothetical protein; K00801 farnesyl-diphosphate farnesyltransferase.
  
  
 0.608
EKF00540.1
Phytoene/squalene synthetase; KEGG: npu:Npun_R2771 8.5e-139 squalene/phytoene synthase; K02291 phytoene synthase.
  
  
 0.608
EKE99097.1
Alpha-2-macroglobulin family region; KEGG: mmu:12266 0.045 C3; complement component 3 K03990.
  
     0.601
EKE97765.1
Hypothetical protein; KEGG: bra:BRADO3863 0.00013 putative gluconolactonase K01053.
 
     0.577
EKF05260.1
Hypothetical protein; KEGG: cpj:CPj0662 0.73 aspS; aspartyl-tRNA synthetase K01876.
       0.560
EKF00303.1
Hypothetical protein; KEGG: mar:MAE_59890 0.0014 gyrA; DNA gyrase subunit A; K02469 DNA gyrase subunit A.
  
  
 0.514
EKE97415.1
Hypothetical protein; KEGG: aci:ACIAD0830 0.51 cafA; ribonuclease G, endoribonuclease G (cytoplasmic axial filament protein) K08301.
  
     0.461
EKF04801.1
Putative exopolysaccharide biosynthesis protein; KEGG: cyc:PCC7424_4310 9.4e-17 capsular exopolysaccharide family.
  
     0.455
EKF03532.1
Hypothetical protein; KEGG: tex:Teth514_1976 2.8e-06 phospholipid/glycerol acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase; Psort location: CytoplasmicMembrane, score: 9.82.
 
   
 0.450
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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