STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF05261.1FAD dependent oxidoreductase; KEGG: cyn:Cyan7425_1174 3.4e-222 All-trans-retinol 13,14-reductase. (520 aa)    
Predicted Functional Partners:
EKE97546.1
Putative squalene/phytoene synthase; KEGG: ana:alr1805 5.4e-128 hypothetical protein; K00801 farnesyl-diphosphate farnesyltransferase.
  
 
 0.825
EKF00540.1
Phytoene/squalene synthetase; KEGG: npu:Npun_R2771 8.5e-139 squalene/phytoene synthase; K02291 phytoene synthase.
  
 
 0.825
EKE97244.1
KEGG: kcr:Kcr_1079 4.3e-32 polyprenyl synthetase; K02523 octaprenyl-diphosphate synthase.
  
 
 0.819
EKE96453.1
KEGG: npu:Npun_F3359 5.4e-233 beta-ketoacyl synthase; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.723
EKE99097.1
Alpha-2-macroglobulin family region; KEGG: mmu:12266 0.045 C3; complement component 3 K03990.
  
  
  0.677
EKF04752.1
Hypothetical protein; KEGG: ava:Ava_3472 2.2e-09 ubiA; tocopherol phytyltransferase K09833.
  
 
 0.669
EKF01324.1
Magnesium chelatase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 
 0.579
EKE97765.1
Hypothetical protein; KEGG: bra:BRADO3863 0.00013 putative gluconolactonase K01053.
 
     0.577
EKF02471.1
Amine oxidase; KEGG: ban:BA1924 3.5e-21 amine oxidase, flavin-containing; K00274 monoamine oxidase.
  
  
 0.575
EKF00303.1
Hypothetical protein; KEGG: mar:MAE_59890 0.0014 gyrA; DNA gyrase subunit A; K02469 DNA gyrase subunit A.
  
 
 0.563
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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