STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05271.1KEGG: ava:Ava_0154 8.5e-178 zinc-containing alcohol dehydrogenase superfamily protein K00008. (348 aa)    
Predicted Functional Partners:
EKE99985.1
Oxidoreductase, zinc-binding dehydrogenase family protein; KEGG: ana:alr5117 2.1e-158 hypothetical protein; K00008 L-iditol 2-dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
  
 
0.918
EKF01993.1
Kinase, PfkB family; KEGG: ava:Ava_2919 1.2e-148 PfkB K00847; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.906
trmB
tRNA synthase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
     
  0.635
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
     
 0.528
EKF01819.1
Hypothetical protein; KEGG: fph:Fphi_0234 0.9990 peptidoglycan glycosyltransferase K03587; Psort location: Cytoplasmic, score: 8.96.
    
  0.512
EKF00815.1
Hypothetical protein; KEGG: eic:NT01EI_0111 0.9996 adenylate cyclase, class I K05851; Psort location: Cytoplasmic, score: 8.96.
    
  0.512
EKE99363.1
KEGG: chu:CHU_3295 2.1e-48 smt; SAM-dependent methyltransferase K00599; Psort location: Cytoplasmic, score: 8.96.
    
  0.512
EKE97077.1
Oxidoreductase, zinc-binding dehydrogenase family protein; KEGG: reh:H16_A0618 3.2e-75 NADPH:quinone reductase or related Zn-dependent oxidoreductase K00344; Psort location: Cytoplasmic, score: 9.97.
 
     0.506
atpC
H(+)-transporting ATPase F; Produces ATP from ADP in the presence of a proton gradient across the membrane.
     
 0.500
atpE
ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
     
 0.498
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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