STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05306.1Hypothetical protein; KEGG: reu:Reut_B5406 0.996 peptidase A24A, prepilin type IV; K02278 prepilin peptidase CpaA. (245 aa)    
Predicted Functional Partners:
EKF05305.1
Hypothetical protein; KEGG: xtr:541454 0.9999 capn1; calpain 1, (mu/I) large subunit; K03853 calpain-2.
       0.541
EKF04836.1
Hypothetical protein; KEGG: pic:PICST_89338 0.34 ERG20; arnesyl diphosphate synthetase (FPP synthetase); K00787 dimethylallyltranstransferase K00795.
      
 0.526
EKF01162.1
Hypothetical protein; KEGG: sce:YIR019C 4.7e-08 MUC1; GPI-anchored cell surface glycoprotein (flocculin) required for pseudohyphal formation, invasive growth, flocculation, and biofilms; transcriptionally regulated by the MAPK pathway (via Ste12p and Tec1p) and the cAMP pathway (via Flo8p) K01178.
      
 0.526
EKF00852.1
Carbohydrate-selective porin OprB; KEGG: shw:Sputw3181_3904 0.43 multi-sensor hybrid histidine kinase; K07679 two-component system, NarL family, sensor histidine kinase EvgS; Psort location: OuterMembrane, score: 9.49; Belongs to the OprB family.
      
 0.523
EKF05304.1
ABC superfamily ATP binding cassette; KEGG: npu:Npun_F4143 8.4e-258 ABC transporter related.
       0.446
EKF05307.1
KEGG: npu:Npun_R4141 1.7e-156 UDP-glucose 4-epimerase K01784; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.400
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.