STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05313.1Transposase; KEGG: esi:Exig_2607 2.7e-39 IS605 family transposase OrfB. (412 aa)    
Predicted Functional Partners:
EKF05320.1
Transposase; KEGG: sis:LS215_1079 1.1e-17 transposase, IS605 OrfB family.
  
     0.766
EKE97723.1
Hypothetical protein; KEGG: gwc:GWCH70_2039 9.3e-12 transposase, IS605 OrfB family.
  
     0.760
EKF02760.1
Putative transposase; KEGG: mse:Msed_1513 5.2e-15 IS605 family transposase OrfB K07496.
  
     0.547
EKF05312.1
KEGG: cyb:CYB_0747 1.0e-37 M28A family peptidase K01423.
       0.486
EKF05314.1
NAD-binding domain 4; KEGG: rha:RHA1_ro08518 2.8e-21 nucleoside-diphosphate-sugar epimerase K01798.
       0.409
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
    
   0.402
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.