STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF05322.1Bacterial extracellular solute-binding protein; KEGG: eci:UTI89_C1581 3.3e-10 ycjN; putative ABC transporter periplasmic binding protein YcjN precursor K02027. (420 aa)    
Predicted Functional Partners:
EKF02602.1
Putative transmembrane permease MsmF; KEGG: scl:sce9265 2.8e-37 ABC transporter permease.
 0.989
EKF00426.1
ABC transporter, permease protein; KEGG: tpd:Teth39_1518 5.6e-71 monosaccharide-transporting ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.989
EKF03761.1
ABC transporter, permease protein; KEGG: smt:Smal_2681 2.3e-49 monosaccharide-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.986
EKF00509.1
KEGG: scl:sce9265 1.5e-38 ABC transporter permease; Psort location: CytoplasmicMembrane, score: 10.00.
 0.986
EKF02064.1
ABC transporter, permease protein; KEGG: cyn:Cyan7425_4398 1.2e-107 monosaccharide-transporting ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.985
EKF00427.1
Putative transmembrane permease MsmF; KEGG: scl:sce9265 6.7e-43 ABC transporter permease; Psort location: CytoplasmicMembrane, score: 10.00.
 0.985
EKF03013.1
ABC transporter, ATP-binding protein; KEGG: npu:Npun_F5477 5.8e-156 ABC transporter related; Psort location: CytoplasmicMembrane, score: 9.98.
 
 0.976
EKF03833.1
ABC transporter, ATP-binding protein; KEGG: ava:Ava_2050 1.5e-182 ABC transporter-like K02023; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.970
EKF04207.1
ABC transporter, ATP-binding protein; KEGG: ava:Ava_4038 3.9e-150 ABC transporter-like K06020; Psort location: CytoplasmicMembrane, score: 7.88.
  
 0.916
EKF05323.1
Hypothetical protein; KEGG: afl:Aflv_0922 0.90 splB; spore photoproduct (thymine dimer) lyase; K03716 spore photoproduct lyase.
       0.569
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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