STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05337.1Hypothetical protein; KEGG: ava:Ava_0501 0.0028 histidine kinase K00936. (68 aa)    
Predicted Functional Partners:
EKF05336.1
Transglycosylase SLT domain protein; KEGG: npu:Npun_R5647 0. lytic transglycosylase, catalytic; K08309 soluble lytic murein transglycosylase.
       0.773
tatC
Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
       0.773
EKF05333.1
KEGG: uur:UU269 0.34 hypothetical protein; K03439 tRNA (guanine-N7-)-methyltransferase.
       0.625
EKF05334.1
Hypothetical protein; KEGG: hau:Haur_3359 0.98 asparagine synthase (glutamine-hydrolyzing); K01953 asparagine synthase (glutamine-hydrolysing).
       0.625
EKF05335.1
Hypothetical protein; KEGG: bcx:BCA_5550 0.25 ung; uracil-DNA glycosylase K03648.
       0.625
EKF05339.1
CsaA protein; KEGG: chu:CHU_3785 1.8e-26 metG; methionine--tRNA ligase (methionine tRNA synthetase) K06878.
       0.596
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.