STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05348.1C-3',4' desaturase CrtD; KEGG: pmn:PMN2A_1137 1.7e-115 UDP-galactopyranose mutase. (503 aa)    
Predicted Functional Partners:
EKF00540.1
Phytoene/squalene synthetase; KEGG: npu:Npun_R2771 8.5e-139 squalene/phytoene synthase; K02291 phytoene synthase.
 
  
 0.853
EKF01324.1
Magnesium chelatase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
  
 0.708
EKE99878.1
Transporter, major facilitator family protein; KEGG: gdj:Gdia_0388 0.026 sugar transporter K08137; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.615
EKE97546.1
Putative squalene/phytoene synthase; KEGG: ana:alr1805 5.4e-128 hypothetical protein; K00801 farnesyl-diphosphate farnesyltransferase.
  
  
 0.608
EKF00360.1
CO2 hydration protein; KEGG: mcc:700251 0.32 PSMA3; proteasome (prosome, macropain) subunit, alpha type, 3; K02727 20S proteasome subunit alpha 7.
  
     0.534
EKF00303.1
Hypothetical protein; KEGG: mar:MAE_59890 0.0014 gyrA; DNA gyrase subunit A; K02469 DNA gyrase subunit A.
  
  
 0.514
EKF00541.1
Phytoene desaturase; KEGG: cyc:PCC7424_1157 1.4e-218 phytoene desaturase K02293; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.508
EKE99777.1
Hypothetical protein; KEGG: dme:Dmel_CG17927 0.00057 Mhc; Myosin heavy chain K10352.
  
     0.491
chlN
Light-independent protochlorophyllide reductase, N subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.
 
  
 0.490
ndhO
Hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.465
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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