STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05367.1Putative S-layer protein; KEGG: ava:Ava_3135 5.9e-44 hypothetical protein. (353 aa)    
Predicted Functional Partners:
EKF03708.1
KEGG: bcg:BCG9842_B4399 3.8e-33 csaB; polysaccharide pyruvyl transferase CsaB.
 
     0.768
EKE99406.1
Hypothetical protein; KEGG: bcg:BCG9842_B3630 0.50 fliI; flagellum-specific ATP synthase; K02412 flagellum-specific ATP synthase.
 
      0.612
EKE96593.1
Transcriptional regulator; KEGG: spo:SPCC364.07 0.14 D-3 phosphoglycerate dehydrogenase (predicted) K00058; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.608
EKF05645.1
Hypothetical protein; KEGG: cyt:cce_4485 1.8e-06 atpG; ATP synthase F0, B' subunit; K02109 F-type H+-transporting ATPase subunit b; Psort location: Cytoplasmic, score: 8.96.
  
     0.563
EKE99077.1
LytR family transcriptional regulator; KEGG: ana:all0844 0.47 peptidyl-tRNA hydrolase K01056; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.517
EKF05366.1
Hypothetical protein; KEGG: pub:SAR11_0354 0.95 parB; chromosome partitioning protein K03497.
       0.480
EKF00731.1
Peptidase, M23 family; KEGG: ava:Ava_0183 5.9e-154 peptidase M23B.
  
     0.438
EKF01442.1
Bicarbonate transporter, IctB family; KEGG: plu:plu4858 6.1e-09 rfaL; O-antigen ligase RfaL; K02847 O-antigen ligase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.435
EKE99692.1
KEGG: cje:Cj0285c 8.3e-06 cheV; chemotaxis protein K03415.
  
     0.434
EKF06105.1
Hypothetical protein; KEGG: eci:UTI89_C1705 5.3e-59 yddW; lipoprotein YddW precursor.
 
      0.422
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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