STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05372.1Hypothetical protein; KEGG: eci:UTI89_C1705 1.5e-11 yddW; lipoprotein YddW precursor. (384 aa)    
Predicted Functional Partners:
EKF05373.1
Hypothetical protein; KEGG: ptm:GSPATT00016894001 0.046 hypothetical protein; K00688 starch phosphorylase.
       0.714
EKF05371.1
Hypothetical protein; KEGG: abu:Abu_2187 0.13 dsbD; thiol:disulfide interchange protein DsbD K04084.
       0.590
EKF06041.1
Hypothetical protein; KEGG: dya:Dyak_GE16376 9.6e-07 GE16376 gene product from transcript GE16376-RA; K10532 heparan-alpha-glucosaminide N-acetyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.442
EKF05218.1
KEGG: tet:TTHERM_00624920 0.27 Protein kinase domain containing protein K08282.
  
     0.436
EKF00934.1
Hypothetical protein; KEGG: eci:UTI89_C0457 1.4e-27 ampG; muropeptide transporter K08218; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.424
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.