STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05405.1Hypothetical protein; KEGG: ava:Ava_4855 8.1e-50 WD-40 repeat-containing serine/threonin protein kinase K00908. (1669 aa)    
Predicted Functional Partners:
EKE99033.1
Oxidoreductase family, NAD-binding Rossmann fold protein; KEGG: cbd:CBUD_0893 7.7e-42 NAD-dependent oxidoreductase.
  
     0.649
EKE99029.1
NAD-binding domain 4; KEGG: rec:RHECIAT_PC0000262 2.7e-119 putative UDP-glucose 4-epimerase protein; Psort location: Cytoplasmic, score: 9.97.
  
 
   0.610
EKE99027.1
KEGG: ssa:SSA_1574 0.00011 glycosyl transferase family protein K03429; Psort location: Cytoplasmic, score: 8.96.
  
     0.493
EKF05699.1
KEGG: har:HEAR2680 7.4e-30 high-affinity branched-chain amino acid ABC transporter ATP-binding protein K01995:K01998; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
    
   0.455
EKF05182.1
Urea ABC transporter, permease protein UrtC; KEGG: har:HEAR2680 1.1e-25 high-affinity branched-chain amino acid ABC transporter ATP-binding protein K01995:K01998; Belongs to the binding-protein-dependent transport system permease family.
    
   0.455
EKE98489.1
KEGG: har:HEAR2680 9.9e-12 high-affinity branched-chain amino acid ABC transporter ATP-binding protein K01995:K01998; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
    
   0.455
EKE99036.1
Bacterial transferase hexapeptide repeat protein; KEGG: abu:Abu_0663 3.3e-25 hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.434
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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