Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EKF05406.1 | EKF05407.1 | FDUTEX481_01578 | FDUTEX481_01579 | Tetratricopeptide repeat-containing domain protein; KEGG: cyn:Cyan7425_4550 6.0e-11 serine/threonine protein kinase with pentapeptide repeats; K08884 serine/threonine protein kinase, bacterial; Psort location: Extracellular, score: 9.72. | Hypothetical protein; KEGG: pph:Ppha_2282 0.31 endonuclease IV K01151; Psort location: CytoplasmicMembrane, score: 9.82. | 0.532 |
EKF05406.1 | EKF05408.1 | FDUTEX481_01578 | FDUTEX481_01580 | Tetratricopeptide repeat-containing domain protein; KEGG: cyn:Cyan7425_4550 6.0e-11 serine/threonine protein kinase with pentapeptide repeats; K08884 serine/threonine protein kinase, bacterial; Psort location: Extracellular, score: 9.72. | KEGG: bbe:BBR47_21330 0.55 hypothetical protein; K01724 4a-hydroxytetrahydrobiopterin dehydratase. | 0.418 |
EKF05407.1 | EKF05406.1 | FDUTEX481_01579 | FDUTEX481_01578 | Hypothetical protein; KEGG: pph:Ppha_2282 0.31 endonuclease IV K01151; Psort location: CytoplasmicMembrane, score: 9.82. | Tetratricopeptide repeat-containing domain protein; KEGG: cyn:Cyan7425_4550 6.0e-11 serine/threonine protein kinase with pentapeptide repeats; K08884 serine/threonine protein kinase, bacterial; Psort location: Extracellular, score: 9.72. | 0.532 |
EKF05407.1 | EKF05408.1 | FDUTEX481_01579 | FDUTEX481_01580 | Hypothetical protein; KEGG: pph:Ppha_2282 0.31 endonuclease IV K01151; Psort location: CytoplasmicMembrane, score: 9.82. | KEGG: bbe:BBR47_21330 0.55 hypothetical protein; K01724 4a-hydroxytetrahydrobiopterin dehydratase. | 0.590 |
EKF05408.1 | EKF05406.1 | FDUTEX481_01580 | FDUTEX481_01578 | KEGG: bbe:BBR47_21330 0.55 hypothetical protein; K01724 4a-hydroxytetrahydrobiopterin dehydratase. | Tetratricopeptide repeat-containing domain protein; KEGG: cyn:Cyan7425_4550 6.0e-11 serine/threonine protein kinase with pentapeptide repeats; K08884 serine/threonine protein kinase, bacterial; Psort location: Extracellular, score: 9.72. | 0.418 |
EKF05408.1 | EKF05407.1 | FDUTEX481_01580 | FDUTEX481_01579 | KEGG: bbe:BBR47_21330 0.55 hypothetical protein; K01724 4a-hydroxytetrahydrobiopterin dehydratase. | Hypothetical protein; KEGG: pph:Ppha_2282 0.31 endonuclease IV K01151; Psort location: CytoplasmicMembrane, score: 9.82. | 0.590 |