STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05411.1Hypothetical protein; KEGG: sde:Sde_0258 0.41 histidine kinase. (154 aa)    
Predicted Functional Partners:
EKF04832.1
Putative general stress response protein; KEGG: cpr:CPR_2504 0.14 punA; purine nucleoside phosphorylase K03783; Belongs to the UPF0337 (CsbD) family.
  
    0.704
EKF04279.1
Hypothetical protein; KEGG: amr:AM1_3347 0.084 tyrS; tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase; Belongs to the UPF0337 (CsbD) family.
  
    0.704
EKF00653.1
CsbD-like protein; KEGG: bli:BL03961 0.21 ywhB; putative 4-oxalocrotonate tautomerase; K01821 4-oxalocrotonate tautomerase; Belongs to the UPF0337 (CsbD) family.
  
    0.704
EKF05410.1
Hypothetical protein; KEGG: bvi:Bcep1808_5810 0.00024 malto-oligosyltrehalose trehalohydrolase; K01236 maltooligosyltrehalose trehalohydrolase; Psort location: CytoplasmicMembrane, score: 9.46.
  
  
 0.636
EKF01942.1
Fasciclin domain protein; KEGG: ava:Ava_3135 1.7e-46 hypothetical protein.
      
 0.599
EKE98579.1
Acid phosphatase SurE; KEGG: ana:alr3139 2.3e-104 surE; stationary phase survival protein SurE K03787; Psort location: Cytoplasmic, score: 8.96.
 
      0.576
EKE98913.1
LysM domain protein; KEGG: atc:AGR_L_2132 0.016 5'-nucleotidase; K01081 5'-nucleotidase.
  
  
 0.440
EKF01508.1
Hypothetical protein; KEGG: nam:NAMH_1277 0.93 metal dependent phosphohydrolase; K00990 [protein-PII] uridylyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.440
EKF05412.1
Hypothetical protein; KEGG: ter:Tery_0188 5.2e-13 glutamate--tRNA(Gln) ligase / glutamyl-tRNA synthetase K01885; Psort location: CytoplasmicMembrane, score: 9.82.
       0.407
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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