STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05461.1Hypothetical protein; KEGG: pae:PA2976 0.0070 rne; ribonuclease E; K08300 ribonuclease E. (77 aa)    
Predicted Functional Partners:
EKF05458.1
Sensor histidine kinase; KEGG: ava:Ava_4928 0. multi-sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 10.00.
       0.570
EKF05459.1
Hypothetical protein; KEGG: tde:TDE2447 0.19 aroK; shikimate kinase K00891.
       0.570
EKF05460.1
KEGG: pfs:PFLU5412 0.031 putative DNA polymerase III, delta subunit; K02340 DNA polymerase III subunit delta; Psort location: Cytoplasmic, score: 8.96.
       0.570
EKF05462.1
Cation transporter/ATPase; KEGG: ava:Ava_3565 3.7e-32 ATPase, E1-E2 type K01537; Psort location: CytoplasmicMembrane, score: 10.00.
       0.480
EKF05463.1
Cation transporting ATPase; KEGG: ava:Ava_3565 1.4e-90 ATPase, E1-E2 type K01537; Psort location: CytoplasmicMembrane, score: 10.00.
       0.480
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.