STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05485.1HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: ana:alr4944 1.9e-86 phosphoglycolate phosphatase; K01091 phosphoglycolate phosphatase; Psort location: Cytoplasmic, score: 8.96. (213 aa)    
Predicted Functional Partners:
EKE96620.1
HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: npu:Npun_R2468 3.5e-101 HAD family hydrolase K01091.
  
  
 0.973
queG
Iron-sulfur cluster binding protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.
    
 0.931
EKE96980.1
Haloacid dehalogenase; KEGG: ava:Ava_4333 5.7e-78 HAD family hydrolase K01091; Psort location: Cytoplasmic, score: 8.96.
  
  
 
0.919
EKF05714.1
KEGG: npu:Npun_R6128 1.9e-244 glycolate oxidase, subunit GlcD K00104; Psort location: Cytoplasmic, score: 8.96.
    
 0.905
EKF00683.1
FAD binding domain protein; KEGG: ava:Ava_4556 1.0e-158 FAD linked oxidase-like K00102.
    
 0.905
EKF00685.1
Cysteine-rich domain protein; KEGG: npu:Npun_F0763 4.8e-223 hypothetical protein K11473.
    
 0.904
EKE97453.1
D-isomer specific 2-hydroxyacid; KEGG: cyp:PCC8801_3049 1.6e-96 glyoxylate reductase; Psort location: Cytoplasmic, score: 9.26; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.901
cbbL
Ribulose bisphosphate carboxylase large chain protein; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
     
  0.900
EKF03610.1
KEGG: npu:Npun_F4197 9.7e-51 ribulose bisphosphate carboxylase, small chain RbcS K01602.
     
 0.900
EKF05263.1
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
  
    0.666
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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