STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05501.1Hypothetical protein; KEGG: sgl:SG2406 0.68 gidB; 16S rRNA methyltransferase GidB; K03501 glucose inhibited division protein B. (220 aa)    
Predicted Functional Partners:
EKF02252.1
Putative SCP extracelular protein; KEGG: bpu:BPUM_3428 0.81 spsJ; spore coat polysaccharide biosynthesis protein SpsJ K01710.
  
     0.699
EKF05500.1
Ribonuclease T(2) family protein; KEGG: mdi:METDI1062 2.2e-35 ribonuclease T2; Psort location: Periplasmic, score: 10.00; Belongs to the RNase T2 family.
       0.483
EKF05699.1
KEGG: har:HEAR2680 7.4e-30 high-affinity branched-chain amino acid ABC transporter ATP-binding protein K01995:K01998; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
    
   0.455
EKF05182.1
Urea ABC transporter, permease protein UrtC; KEGG: har:HEAR2680 1.1e-25 high-affinity branched-chain amino acid ABC transporter ATP-binding protein K01995:K01998; Belongs to the binding-protein-dependent transport system permease family.
    
   0.455
EKE98489.1
KEGG: har:HEAR2680 9.9e-12 high-affinity branched-chain amino acid ABC transporter ATP-binding protein K01995:K01998; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
    
   0.455
EKF05462.1
Cation transporter/ATPase; KEGG: ava:Ava_3565 3.7e-32 ATPase, E1-E2 type K01537; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
  0.433
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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