STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF05502.13-octaprenyl-4- hydroxybenzoate; KEGG: ana:alr1108 1.1e-264 hypothetical protein; K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD; Psort location: Cytoplasmic, score: 8.96. (502 aa)    
Predicted Functional Partners:
ubiX
Aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
 
 0.988
plqA
4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of plastoquinone-9 (PQ-9) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 4-hydroxy-3-solanesylbenzoate. Belongs to the UbiA prenyltransferase family.
 
  
 0.894
EKE97727.1
Prenyltransferase, UbiA family; KEGG: npu:Npun_F5234 5.4e-121 UbiA prenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.706
EKF05330.1
2-octaprenyl-6-methoxyphenyl hydroxylase; KEGG: npu:Npun_R5650 1.6e-185 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; K03185 2-octaprenyl-6-methoxyphenol hydroxylase.
 
  
 0.605
cofH
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit; Catalyzes the radical-mediated synthesis of 5-amino-5-(4- hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil from 5-amino-6-(D- ribitylamino)uracil and L-tyrosine.
 
   
 0.604
EKF04752.1
Hypothetical protein; KEGG: ava:Ava_3472 2.2e-09 ubiA; tocopherol phytyltransferase K09833.
    
 0.603
EKF04751.1
Putative SAM-dependent methyltransferase; KEGG: cli:Clim_2013 2.0e-05 ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase.
    
 0.542
EKF04929.1
Dimethylallyltranstransferase; KEGG: ava:Ava_3472 4.9e-127 ubiA; tocopherol phytyltransferase K09833.
    
 0.522
EKF03432.1
Chlorophyll synthase; KEGG: ana:all4480 9.0e-167 chlG; bacteriochlorophyll/chlorophyll a synthase; K04040 chlorophyll synthase; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.522
EKF05503.1
Hypothetical protein; KEGG: seh:SeHA_C3261 0.96 phosphotransferase system lactose/cellobiose-specific IIB subunit; K02774 PTS system, galactitol-specific IIB component.
       0.519
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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