STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05524.1Toxin-antitoxin system, toxin component, RelE family; KEGG: bfo:BRAFLDRAFT_61924 0.61 hypothetical protein; K01468 imidazolonepropionase. (109 aa)    
Predicted Functional Partners:
EKF05525.1
Putative XRE family transcriptional regulator; KEGG: bra:BRADO5909 0.993 NAD(P)H-flavin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
 
 
 
 0.986
EKF05526.1
Putative type I site-specific deoxyribonuclease specificity subunit; KEGG: glo:Glov_0844 5.6e-87 restriction endonuclease S subunits-like protein; K01154 type I restriction enzyme, S subunit.
       0.779
EKF05527.1
Type I site-specific deoxyribonuclease restriction subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.774
EKF00291.1
RE family transcriptional regulator; KEGG: iho:Igni_0691 0.088 flap endonuclease-1; K04799 flap endonuclease-1.
 
 
 
 0.768
EKF05528.1
Hypothetical protein; KEGG: fjo:Fjoh_0748 0.99 phosphate acetyltransferase K07559; Psort location: Cytoplasmic, score: 8.96.
       0.615
EKF05529.1
Hypothetical protein; KEGG: pne:Pnec_1437 0.94 alanyl-tRNA synthetase K01872.
       0.510
EKF05522.1
Type I site-specific deoxyribonuclease methyltransferase subunit; KEGG: ajs:Ajs_3610 2.7e-190 N-6 DNA methylase; K03427 type I restriction enzyme M protein; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name.
       0.471
EKF05523.1
KEGG: neu:NE2524 4.9e-182 type I restriction-modification system methylation subunit K03427; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name.
       0.471
EKE99241.1
Bacteriophage protein; KEGG: pla:Plav_2344 0.994 HsdR family type I site-specific deoxyribonuclease; K01153 type I restriction enzyme, R subunit; Psort location: Cytoplasmic, score: 8.96.
  
     0.427
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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