STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF05525.1Putative XRE family transcriptional regulator; KEGG: bra:BRADO5909 0.993 NAD(P)H-flavin oxidoreductase; Psort location: Cytoplasmic, score: 8.96. (368 aa)    
Predicted Functional Partners:
EKF05524.1
Toxin-antitoxin system, toxin component, RelE family; KEGG: bfo:BRAFLDRAFT_61924 0.61 hypothetical protein; K01468 imidazolonepropionase.
 
 
 
 0.986
EKF05526.1
Putative type I site-specific deoxyribonuclease specificity subunit; KEGG: glo:Glov_0844 5.6e-87 restriction endonuclease S subunits-like protein; K01154 type I restriction enzyme, S subunit.
 
     0.834
EKF00290.1
Plasmid maintenance system killer protein; KEGG: tva:TVAG_111700 0.040 phosphomanomutase; K01840 phosphomannomutase.
 
 
 
 0.808
EKF05527.1
Type I site-specific deoxyribonuclease restriction subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.804
ruvA
Crossover junction forming protein; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.
     
  0.763
EKF04457.1
ATP-dependent DNA helicase; KEGG: cgl:NCgl0704 9.8e-42 cgl0735; putative helicase K01529; Psort location: Cytoplasmic, score: 8.96.
 
  
  0.718
EKF04010.1
Hypothetical protein; KEGG: lbc:LACBIDRAFT_189840 0.065 hypothetical protein; K03946 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 2; Psort location: Cytoplasmic, score: 8.96.
    
  0.686
EKE98721.1
Hypothetical protein; KEGG: psp:PSPPH_5165 0.84 SPFH domain-containing protein; K04087 membrane protease subunit HflC; Psort location: Cytoplasmic, score: 8.96.
    
  0.686
EKF02051.1
Tetratricopeptide repeat protein; KEGG: cbb:CLD_1251 6.1e-14 pcrA; ATP-dependent DNA helicase PcrA K03657; Psort location: Cytoplasmic, score: 9.97.
    
  0.670
EKE97437.1
KEGG: ava:Ava_1425 0. UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 8.96.
    
  0.663
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.