STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04476.1Hypothetical protein; KEGG: cbi:CLJ_B2508 1.2e-05 N-acetylmuramoyl-L-alanine amidase K01448. (136 aa)    
Predicted Functional Partners:
EKF04475.1
Putative abortive infection protein; KEGG: gfo:GFO_0014 1.0e-05 metal-dependent membrane protease K01376; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.767
EKF03861.1
Sensor histidine kinase; KEGG: ava:Ava_0362 0. PAS/PAC sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.673
EKF03375.1
Hypothetical protein; KEGG: cpb:Cphamn1_0100 0.998 ATP-dependent metalloprotease FtsH K03798.
  
     0.629
EKE96578.1
Bacteriophage DNA primase; KEGG: hwa:HQ4022A 0.00011 putative P4-specific DNA primase K00992; Psort location: Cytoplasmic, score: 8.96.
  
     0.629
EKE96794.1
Hypothetical protein; KEGG: pnu:Pnuc_0958 0.70 2-hydroxy-3-oxopropionate reductase K00042; Psort location: Cytoplasmic, score: 8.96.
  
     0.627
EKE98218.1
Hypothetical protein; KEGG: lfe:LAF_0763 0.49 hisE; phosphoribosyl-ATP pyrophosphatase; K01523 phosphoribosyl-ATP pyrophosphohydrolase; Psort location: Cytoplasmic, score: 8.96.
  
     0.623
EKF04474.1
CAAX amino terminal protease family protein; KEGG: gfo:GFO_0014 0.017 metal-dependent membrane protease K01376; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.599
EKE99109.1
Hypothetical protein; KEGG: cco:CCC13826_0813 7.4e-09 panB; ketopantoate hydroxymethyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
     0.599
EKF04473.1
Hypothetical protein; KEGG: deb:DehaBAV1_0857 0.13 prolipoprotein diacylglyceryl transferase; K00785 beta-galactosamide-alpha-2,3-sialyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.596
EKF03187.1
KEGG: bha:BH1295 8.3e-10 hypothetical protein; K01448 N-acetylmuramoyl-L-alanine amidase.
  
     0.569
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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