STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKF04517.1Putative SnoaL family, polyketide cyclase; KEGG: bfr:BF0712 0.68 DNA polymerase III alpha subunit; K02337 DNA polymerase III subunit alpha. (342 aa)    
Predicted Functional Partners:
EKF04516.1
Cytochrome P450; KEGG: sen:SACE_3928 3.9e-63 cyp51; cytochrome P450 51 K05917; Psort location: Cytoplasmic, score: 9.97.
       0.603
EKF01737.1
Type I secretion system ATPase; KEGG: npu:Npun_F5890 3.0e-278 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K06147; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.598
EKE99718.1
Type I secretion system ATPase; KEGG: ava:Ava_1188 0. cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters K06147.
    
  0.598
EKF04518.1
snoaL-like polyketide cyclase; KEGG: dat:HRM2_17880 0.68 acyl-CoA thioester hydrolase; Psort location: Cytoplasmic, score: 8.96.
       0.532
EKF05079.1
GMP synthase; KEGG: ava:Ava_1294 0. glutamate synthase (ferredoxin) K00284.
     
 0.475
EKF03459.1
ABC superfamily ATP binding cassette; KEGG: npu:Npun_F3519 0. cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; Psort location: CytoplasmicMembrane, score: 10.00.
     
  0.458
EKE98998.1
ABC transporter, ATP-binding protein; KEGG: npu:Npun_R1802 0. ABC transporter related; Psort location: CytoplasmicMembrane, score: 10.00.
     
  0.458
EKE98999.1
ABC transporter, ATP-binding protein; KEGG: npu:Npun_R1803 3.9e-285 ABC transporter related; Psort location: CytoplasmicMembrane, score: 10.00.
     
  0.458
EKE98330.1
KEGG: ava:Ava_1129 1.7e-243 ABC transporter, transmembrane region K06148; Psort location: CytoplasmicMembrane, score: 10.00.
     
  0.458
EKE98332.1
ABC transporter, ATP-binding protein; KEGG: npu:Npun_R1802 7.7e-232 ABC transporter related; Psort location: CytoplasmicMembrane, score: 10.00.
     
  0.458
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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