STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04529.1Hypothetical protein; KEGG: sma:SAV_6795 0.65 cobT2; nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; K04719 cob(II)yrinic acid a,c-diamide reductase; Psort location: Cytoplasmic, score: 8.96. (323 aa)    
Predicted Functional Partners:
EKF04531.1
Hypothetical protein; KEGG: amt:Amet_3186 0.012 NQR2 and RnfD family protein; K00347 Na+-transporting NADH:ubiquinone oxidoreductase subunit B; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.952
EKF04530.1
FG-GAP repeat protein; KEGG: rba:RB105 0.00031 cysteine proteinase K01376.
    
  0.947
EKF04528.1
Hypothetical protein; KEGG: mmu:76969 0.98 Chst1; carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 K01022.
       0.566
EKF04532.1
Beta-ketoacyl synthase protein; KEGG: saq:Sare_0551 0. erythronolide synthase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.502
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.