STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
EKF04537.1Putative phycobilisome lyase; KEGG: mdo:100011238 0.96 similar to Deoxyhypusine hydroxylase/monooxygenase; K06072 deoxyhypusine monooxygenase; Psort location: Cytoplasmic, score: 8.96. (436 aa)    
Predicted Functional Partners:
EKF04538.1
Putative SAM dependent methyltransferase; KEGG: dat:HRM2_40940 4.3e-48 ubiE5; UbiE5.
       0.773
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
   
  0.678
EKF04539.1
Cytochrome P450; KEGG: npu:Npun_R1394 1.6e-48 cytochrome P450; Psort location: Cytoplasmic, score: 9.26.
   
   0.526
EKF04536.1
KEGG: pjd:Pjdr2_5363 1.3e-14 transcriptional regulator, AraC family.
       0.452
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.