STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF04566.1Hypothetical protein; KEGG: npu:Npun_AF093 3.3e-38 peptidase S8 and S53, subtilisin, kexin, sedolisin. (174 aa)    
Predicted Functional Partners:
EKF04565.1
Hypothetical protein; KEGG: npu:Npun_AF093 4.8e-46 peptidase S8 and S53, subtilisin, kexin, sedolisin.
      0.822
secY
Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.588
EKF01733.1
SCP-like extracellular protein; KEGG: psp:PSPPH_5061 1.3e-17 poly(beta-D-mannuronate) C5 epimerase 3 (mannuronanepimerase 3) K01795; Psort location: Extracellular, score: 10.00.
  
 
 0.525
EKF04564.1
Hypothetical protein; KEGG: ecb:100055407 0.17 PLCB3; phospholipase C, beta 3 (phosphatidylinositol-specific); K05858 phospholipase C, beta; Psort location: Cytoplasmic, score: 8.96.
       0.446
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.