STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04576.1Hypothetical protein; KEGG: bbe:BBR47_40320 0.9999 hypothetical protein; K01975 2'-5' RNA ligase; Psort location: Cytoplasmic, score: 8.96. (435 aa)    
Predicted Functional Partners:
EKE98494.1
KEGG: sfu:Sfum_1398 1.5e-187 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; K00359 NADH oxidase.
    
 0.671
EKF04574.1
Hypothetical protein; KEGG: deb:DehaBAV1_0044 0.9996 DNA polymerase III, delta subunit; K02340 DNA polymerase III subunit delta.
       0.664
EKF04575.1
Hypothetical protein; KEGG: chu:CHU_3086 0.51 argB; N-acetylglutamate kinase K00930; Psort location: CytoplasmicMembrane, score: 9.82.
       0.664
EKE97447.1
AMP-binding enzyme; KEGG: ava:Ava_1613 0. non-ribosomal peptide synthase.
  
 
 0.656
EKF01032.1
Hypothetical protein; KEGG: bcz:BCZK2789 0.00051 prpA; serine/threonine protein phosphatase K01090.
    
  0.622
EKF04573.1
Response regulator; KEGG: npu:Npun_F0484 8.5e-36 two component LuxR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
       0.619
EKE99123.1
Branched-chain alpha-keto acid dehydrogenase subunit E2; KEGG: npu:Npun_F6414 1.4e-193 dehydrogenase catalytic domain-containing protein K00627; Psort location: Cytoplasmic, score: 9.26.
    
  0.581
EKF01144.1
AMP-binding enzyme; KEGG: npu:Npun_F2181 0. amino acid adenylation domain-containing protein.
   
 
 0.573
EKE96453.1
KEGG: npu:Npun_F3359 5.4e-233 beta-ketoacyl synthase; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.567
rpsJ
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
    
  0.560
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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