STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04199.1ISSpo6, transposase OrfB family protein; KEGG: fth:FTH_1650 6.4e-15 isftu1; ISFtu1 transposase K01152. (171 aa)    
Predicted Functional Partners:
EKF04198.1
Putative transposase; KEGG: sat:SYN_01717 0.93 threonyl-tRNA synthetase K01868.
       0.581
EKF04197.1
Hypothetical protein; KEGG: cme:CMI084C 0.033 ribulose-5-phosphate-3-epimerase precursor; K01783 ribulose-phosphate 3-epimerase; Psort location: Cytoplasmic, score: 8.96.
       0.473
EKE97940.1
Hypothetical protein; KEGG: pfo:Pfl01_4699 0.90 tryptophanyl-tRNA synthetase K01867.
  
     0.436
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.