STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04247.1ABC transporter, ATP-binding protein; KEGG: npu:Npun_F2805 1.1e-152 ABC transporter related; Psort location: CytoplasmicMembrane, score: 7.88. (316 aa)    
Predicted Functional Partners:
EKF02942.1
ABC-2 type transporter; KEGG: bbt:BBta_3660 3.2e-33 ABC transporter permease ATP-binding protein K01990:K01992; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.969
EKF02944.1
ABC-2 type transporter; KEGG: bbt:BBta_7849 8.4e-33 ABC transporter permease ATP-binding protein K01990:K01992; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.969
EKF04245.1
Hypothetical protein; KEGG: bpm:BURPS1710b_1121 0.072 lspA; lipoprotein signal peptidase K03101; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.890
EKF06208.1
KEGG: npu:Npun_F6325 6.2e-223 polar amino acid ABC transporter, inner membrane subunit K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.833
EKF00051.1
ABC transporter, permease protein; KEGG: npu:Npun_R0695 1.5e-70 extracellular solute-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.833
EKF05912.1
KEGG: ava:Ava_0243 9.2e-268 molybdate ABC transporter permease K02018; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.741
atpC
H(+)-transporting ATPase F; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
  0.739
atpD
H(+)-transporting ATPase F(1) beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
  0.716
EKF04963.1
ABC-2 type transporter; KEGG: dme:Dmel_CG33970 5.2e-05 CG33970 gene product from transcript CG33970-RA K01509.
  
 
 0.707
EKE98940.1
KEGG: bbt:BBta_7849 1.8e-06 ABC transporter permease ATP-binding protein K01990:K01992; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.707
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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