STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04250.1Transporter, small conductance mechanosensitive ion channel family protein; KEGG: mla:Mlab_1701 2.3e-19 phosphoglycerate mutase K01834; Psort location: CytoplasmicMembrane, score: 10.00. (283 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
    0.657
EKF04251.1
Hypothetical protein; KEGG: mla:Mlab_1207 0.89 7-cyano-7-deazaguanine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase.
       0.588
EKF04090.1
Transporter, small conductance mechanosensitive ion channel family protein; KEGG: mla:Mlab_1701 1.7e-13 phosphoglycerate mutase K01834; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.513
EKF04252.1
Hypothetical protein; KEGG: vap:Vapar_2398 0.85 FAD dependent oxidoreductase; K03153 glycine oxidase.
       0.424
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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