STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04267.1Hypothetical protein; KEGG: ttu:TERTU_3447 6.0e-17 xylanase / methyl-glucuronoyl esterase. (1139 aa)    
Predicted Functional Partners:
EKF01519.1
Hypothetical protein; KEGG: pna:Pnap_3769 0.75 holA; DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta; Psort location: Cytoplasmic, score: 8.96.
  
     0.525
EKF02528.1
Sensor histidine kinase; KEGG: ava:Ava_0612 3.2e-146 GAF sensor signal transduction histidine kinase K00936.
  
     0.518
EKF04859.1
KEGG: cya:CYA_2756 2.3e-09 protein kinase K00924.
  
     0.465
EKE97887.1
Methyltransferase domain protein; KEGG: scl:sce4058 3.3e-11 putative methyltransferase.
  
     0.461
EKF01858.1
Lanthionine synthetase C-like protein; KEGG: tex:Teth514_1013 0.82 nucleotidyl transferase; K00966 mannose-1-phosphate guanylyltransferase K01840; Psort location: OuterMembrane, score: 9.49.
  
     0.460
EKF04801.1
Putative exopolysaccharide biosynthesis protein; KEGG: cyc:PCC7424_4310 9.4e-17 capsular exopolysaccharide family.
  
     0.456
EKF00686.1
Putative DNA-binding HTH protein; KEGG: pmj:P9211_08611 0.98 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502.
  
     0.451
EKF02142.1
Putative SAM-dependent protein; KEGG: msm:MSMEG_4708 2.8e-14 putative methyltransferase K00599; Psort location: Cytoplasmic, score: 8.96.
  
     0.449
EKE96319.1
Putative toxin-antitoxin system, toxin component; KEGG: sse:Ssed_1603 0.84 ribA; GTP cyclohydrolase II K01497.
  
     0.446
EKF06159.1
Hypothetical protein; KEGG: bwe:BcerKBAB4_2153 4.2e-05 1A family penicillin-binding protein; K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 9.86.
  
     0.442
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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