STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04276.1Hypothetical protein; KEGG: pti:PHATRDRAFT_11305 0.49 hypothetical protein; K03965 NADH dehydrogenase (ubiquinone) 1 beta subcomplex 9; Psort location: Cytoplasmic, score: 8.96. (162 aa)    
Predicted Functional Partners:
EKE98428.1
Sensor histidine kinase; KEGG: ava:Ava_1564 3.7e-276 multi-sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.808
EKE99368.1
Sensor histidine kinase; KEGG: ava:Ava_1564 0. multi-sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.808
EKE98746.1
Response regulator; KEGG: ava:Ava_2420 1.9e-156 PAS/PAC sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88.
  
  
 0.744
EKE96880.1
PAS domain S-box; KEGG: syn:slr1759 2.1e-245 hybrid sensory kinase; K02489 two-component system, PleD related family, sensor kinase and response regulator; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.743
EKF01595.1
Sensor histidine kinase; KEGG: ana:all2875 3.7e-177 two-component hybrid sensor and regulator; K02489 two-component system, PleD related family, sensor kinase and response regulator; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.697
EKF00985.1
KEGG: afw:Anae109_0803 3.5e-156 histidine kinase; Psort location: CytoplasmicMembrane, score: 7.88.
  
 
 0.697
EKF04830.1
Response regulator; KEGG: ava:Ava_4779 0. multi-sensor hybrid histidine kinase K00936.
  
  
 0.695
cofG
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit; Catalyzes the radical-mediated synthesis of 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) from 5-amino-5-(4-hydroxybenzyl)-6-(D- ribitylimino)-5,6-dihydrouracil.
   
    0.669
cofH
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit; Catalyzes the radical-mediated synthesis of 5-amino-5-(4- hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil from 5-amino-6-(D- ribitylamino)uracil and L-tyrosine.
   
    0.669
EKE97199.1
Sensor histidine kinase; KEGG: cyn:Cyan7425_3279 2.5e-132 multi-sensor hybrid histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.667
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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