STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKF04344.1Hypothetical protein; KEGG: sce:YDL042C 0.45 SIR2; Conserved NAD+ dependent histone deacetylase of the Sirtuin family involved in regulation of lifespan; plays roles in silencing at HML, HMR, telomeres, and the rDNA locus; negatively regulates initiation of DNA replication; K11121 NAD-dependent histone deacetylase SIR2. (71 aa)    
Predicted Functional Partners:
EKF04342.1
KEGG: kla:KLLA0F11000g 0.20 hypothetical protein; K08592 sentrin-specific protease 1; Psort location: Cytoplasmic, score: 8.96.
      0.943
EKF04341.1
Hypothetical protein; KEGG: pop:POPTR_263099 0.999 hypothetical protein; K09579 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4; Psort location: CytoplasmicMembrane, score: 9.82.
       0.538
EKF04343.1
IS66 transposase; KEGG: pic:PICST_61628 0.72 MGS1; DNA-dependent ATPase MGS1 (Maintenance of genome stability protein 1) DNA-directed DNA polymerase ATPase K07478; Psort location: Cytoplasmic, score: 8.96.
       0.538
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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