STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04346.1KEGG: pjd:Pjdr2_5363 7.6e-16 transcriptional regulator, AraC family; Psort location: Cytoplasmic, score: 9.97. (309 aa)    
Predicted Functional Partners:
EKE99936.1
KEGG: bur:Bcep18194_C7173 3.9e-07 two component AraC family transcriptional regulator K05971; Psort location: Cytoplasmic, score: 9.97.
  
     0.705
EKE96810.1
KEGG: npu:Npun_R3197 2.0e-36 two component AraC family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
  
     0.675
EKF04348.1
Hypothetical protein; KEGG: pyo:PY05542 0.32 s-adenosyl-methyltransferase Mraw; K03438 S-adenosyl-methyltransferase.
       0.658
rpoA
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.630
EKF04347.1
KEGG: xtr:100135385 0.22 hypothetical protein LOC100135385; K01555 fumarylacetoacetase.
       0.572
EKE99946.1
AraC family transcriptional regulator; KEGG: bay:RBAM_037970 3.8e-08 adaA; AdaA K10778; Psort location: Cytoplasmic, score: 9.97.
  
     0.570
EKF05757.1
KEGG: shn:Shewana3_3435 1.7e-30 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
  
    0.541
EKF04349.1
Carboxymethylenebutenolidase; KEGG: ava:Ava_2055 6.3e-95 dienelactone hydrolase K01061.
       0.514
EKF06242.1
KEGG: shn:Shewana3_3435 1.9e-29 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.26; Belongs to the LysR transcriptional regulatory family.
  
    0.494
EKF04345.1
Hypothetical protein; KEGG: amt:Amet_0069 0.50 precorrin-8X methylmutase CbiC/CobH; K06042 precorrin-8X methylmutase; Psort location: Cytoplasmic, score: 8.96.
       0.413
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.