STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04356.1KEGG: npu:Npun_F2286 1.9e-116 short-chain dehydrogenase/reductase SDR; Psort location: Cytoplasmic, score: 9.26; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (271 aa)    
Predicted Functional Partners:
EKE97447.1
AMP-binding enzyme; KEGG: ava:Ava_1613 0. non-ribosomal peptide synthase.
  
 0.939
EKE96453.1
KEGG: npu:Npun_F3359 5.4e-233 beta-ketoacyl synthase; Psort location: CytoplasmicMembrane, score: 9.82.
   
 0.870
EKE97069.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: lsp:Bsph_4541 5.4e-57 3-oxoacyl-[acyl-carrier-protein] reductase; Psort location: Cytoplasmic, score: 9.26.
  
 
  0.862
EKF06119.1
KEGG: npu:Npun_R3425 0. beta-ketoacyl synthase; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.857
EKF05346.1
KEGG: mgl:MGL_2782 1.7e-14 hypothetical protein; K03006 DNA-directed RNA polymerase II subunit A.
   
 0.857
EKE99923.1
KEGG: npu:Npun_R3426 0. beta-ketoacyl synthase; Psort location: CytoplasmicMembrane, score: 9.82.
   
 0.857
EKF01745.1
Putative 3-ketoacylreductase, short chain dehydrogenase; KEGG: bbe:BBR47_10320 1.8e-26 fabL; enoyl-[acyl-carrier-protein] reductase [NADH] K10780; Psort location: Cytoplasmic, score: 9.26.
  
 
  0.850
EKF04532.1
Beta-ketoacyl synthase protein; KEGG: saq:Sare_0551 0. erythronolide synthase; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.800
EKF01144.1
AMP-binding enzyme; KEGG: npu:Npun_F2181 0. amino acid adenylation domain-containing protein.
  
 0.795
EKF04357.1
KEGG: sth:STH1825 0.99 hypothetical protein; K01515 ADP-ribose pyrophosphatase.
       0.762
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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