STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04383.1Hypothetical protein; KEGG: cbu:CBU_1797 0.92 thioesterase family protein. (42 aa)    
Predicted Functional Partners:
EKF04382.1
KEGG: uma:UM04707.1 0.78 hypothetical protein; K01424 L-asparaginase.
       0.682
EKF04380.1
Hypothetical protein; KEGG: ttu:TERTU_0301 0.42 eutB; ethanolamine ammonia-lyase, large subunit K03735.
       0.486
EKF04381.1
Hypothetical protein; KEGG: kol:Kole_1395 0.53 conserved carboxylase region; K01571 oxaloacetate decarboxylase, alpha subunit.
       0.486
EKF04379.1
Hypothetical protein; KEGG: cbe:Cbei_1879 0.26 serine-type D-Ala-D-Ala carboxypeptidase; Psort location: CytoplasmicMembrane, score: 9.82.
       0.417
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.