STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04170.1Hypothetical protein; KEGG: mba:Mbar_A2262 5.5e-07 iron(III) ABC transporter, ATP-binding protein; K02013 iron complex transport system ATP-binding protein. (440 aa)    
Predicted Functional Partners:
EKF04171.1
Hypothetical protein; KEGG: rco:RC0080 0.45 def3; polypeptide deformylase K01462; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.856
EKE96556.1
Toxin-antitoxin system, toxin component, PIN family.
  
     0.584
EKE98475.1
Ribonucleoside-triphosphate; KEGG: ana:all4035 0. hypothetical protein; K00524 ribonucleotide reductase, class II.
  
     0.507
EKF05613.1
Hypothetical protein; KEGG: dya:Dyak_GE12699 0.24 GE12699 gene product from transcript GE12699-RA; K01254 leukotriene-A4 hydrolase; Psort location: Cytoplasmic, score: 8.96.
  
     0.477
EKE99505.1
Hypothetical protein; KEGG: fno:Fnod_0828 0.53 uridylate kinase; K09903 uridylate kinase; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.464
EKE99436.1
PIN domain protein; KEGG: hsm:HSM_0838 0.9996 rnc; ribonuclease III K03685; Psort location: Cytoplasmic, score: 8.96.
  
     0.463
EKF04120.1
Hypothetical protein; KEGG: bha:BH2004 7.4e-06 gentisate 1,2-dioxygenase; K00450 gentisate 1,2-dioxygenase.
  
     0.445
EKF04172.1
Hypothetical protein; KEGG: cfa:488195 0.36 RIPK1; receptor (TNFRSF)-interacting serine-threonine kinase 1; K02861 receptor-interacting serine/threonine-protein kinase 1.
       0.436
xseB
Exodeoxyribonuclease VII small; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
  
     0.431
EKE98674.1
KEGG: ana:all0934 1.1e-186 site-specific DNA-methyltransferase; K00558 DNA (cytosine-5-)-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.429
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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