STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04173.1PBS lyase HEAT domain protein; KEGG: nph:NP2168A 9.6e-29 che operon protein (homolog 1 to phycocyanobilin lyase subunit); Psort location: Cytoplasmic, score: 8.96. (1367 aa)    
Predicted Functional Partners:
EKE98023.1
WD domain, G-beta repeat protein; KEGG: ava:Ava_4855 1.6e-19 WD-40 repeat-containing serine/threonin protein kinase K00908.
  
 
  0.755
EKE99703.1
Putative WD-repeat plasmid protein; KEGG: rha:RHA1_ro10389 0.00011 protein kinase/LuxR family transcriptional regulator K08282.
  
 
  0.747
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
   
 0.715
EKF00793.1
KEGG: hau:Haur_4088 8.2e-70 silent information regulator protein Sir2; K12410 NAD-dependent deacetylase.
   
   0.696
EKE96542.1
Hypothetical protein; KEGG: shl:Shal_3008 1.8e-11 polyketide-type polyunsaturated fatty acid synthase, PfaA.
 
 
   0.676
EKF02777.1
Putative NB-ARC domain regulatory protein; KEGG: sse:Ssed_3202 7.6e-18 erythronolide synthase K10817; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
   0.668
EKE99230.1
Sensor histidine kinase; KEGG: ava:Ava_4326 1.6e-176 PAS/PAC sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88; overlaps another CDS with the same product name.
 
   
 0.603
EKE96501.1
KEGG: rha:RHA1_ro03019 0.0010 protein kinase/LuxR family transcriptional regulator K08282.
 
 
   0.597
EKF04185.1
Response regulator; KEGG: fal:FRAAL1304 0.0027 putative protein-glutamate methylesterase; Psort location: Cytoplasmic, score: 8.96.
  
     0.596
EKE98156.1
ICE-like protease p20 domain protein; KEGG: scl:sce4551 1.2e-78 protein kinase.
 
 
  0.573
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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