STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03764.1Putative S1 family peptidase; KEGG: rce:RC1_3929 9.8e-13 protease, putative; K04775 protease YdgD. (320 aa)    
Predicted Functional Partners:
EKF03313.1
Hypothetical protein.
  
     0.669
EKF03969.1
Hypothetical protein; KEGG: rfe:RF_0576 0.20 lnt; apolipoprotein N-acyltransferase K03820; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.638
EKE96908.1
Hypothetical protein; KEGG: ptr:466440 0.9998 WEE1; WEE1 homolog (S. pombe); K06632 wee1-like protein kinase.
  
     0.494
EKE98279.1
KEGG: chu:CHU_2979 7.0e-24 TPR repeat-containing protein K06026.
  
     0.460
EKF05187.1
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein; KEGG: cgr:CAGL0F08789g 0.67 hypothetical protein; K01738 cysteine synthase A.
   
    0.458
EKE98699.1
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein; KEGG: shm:Shewmr7_0437 9.4e-05 histidine kinase.
   
    0.458
EKE96847.1
Hypothetical protein; KEGG: saz:Sama_2434 0.096 exodeoxyribonuclease VII, small subunit; K03602 exodeoxyribonuclease VII small subunit; Psort location: Cytoplasmic, score: 8.96.
   
    0.458
EKF01721.1
Hypothetical protein; KEGG: acr:Acry_1594 0.73 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 9.82.
   
    0.458
EKF04742.1
UV damage endonuclease; KEGG: hma:rrnAC2096 1.4e-24 uvsE; putative UV damage endonuclease K01567.
  
     0.455
EKF04094.1
Putative DNA and RNA helicase, superfamily I; KEGG: lsp:Bsph_0887 8.0e-98 putative ATP-dependent helicase.
  
     0.434
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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