STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03826.1Putative surface antigen; KEGG: cre:CHLREDRAFT_195498 1.1e-74 OEP80; chloroplast outer envelope protein K07277; Psort location: OuterMembrane, score: 10.00. (727 aa)    
Predicted Functional Partners:
EKF01940.1
WGR domain protein; KEGG: mmu:231326 0.017 Aasdh; aminoadipate-semialdehyde dehydrogenase K00142.
  
 0.958
lpxD
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
 
  
 0.927
lpxA
acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
  
 0.913
EKF02154.1
Hypothetical protein; KEGG: rec:RHECIAT_CH0004130 3.0e-11 hypothetical protein K09800.
 
  
 0.853
EKF03825.1
Hypothetical protein; KEGG: cts:Ctha_0833 0.041 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.842
EKE99776.1
KEGG: npu:Npun_R2832 1.1e-63 peptidylprolyl isomerase, FKBP-type.
   
 
 0.819
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
 
    0.813
EKF00095.1
Hypothetical protein; KEGG: rec:RHECIAT_CH0004130 1.9e-12 hypothetical protein K09800; Psort location: OuterMembrane, score: 9.82.
 
  
 0.804
EKE99417.1
RIP metalloprotease RseP; KEGG: syr:SynRCC307_0546 3.3e-89 membrane-associated Zn-dependent protease K01417; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.801
lpxC
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.
 
   
 0.794
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.