Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03700.1Hypothetical protein; KEGG: edi:EDI_201830 2.6e-12 GRIP domain-containing protein RUD3; Psort location: Cytoplasmic, score: 8.96. (327 aa)    
Predicted Functional Partners:
EKE98793.1
Hypothetical protein; KEGG: nam:NAMH_1387 0.65 tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) K04075.
  
     0.748
EKF04245.1
Hypothetical protein; KEGG: bpm:BURPS1710b_1121 0.072 lspA; lipoprotein signal peptidase K03101; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.727
EKF03701.1
Putative DNA repair ATPase; KEGG: edi:EDI_192260 5.6e-14 eukaryotic translation initiation factor 3 subunit; Psort location: Cytoplasmic, score: 8.96.
 
    
0.719
EKE98790.1
Putative DNA repair protein; KEGG: edi:EDI_048910 5.6e-12 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
  
     0.685
EKF01664.1
Dynamin family protein; KEGG: afm:AFUA_5G13392 1.9e-10 transmembrane GTPase Fzo1 K06030; Psort location: Cytoplasmic, score: 8.96.
  
     0.678
EKF01924.1
Hypothetical protein; KEGG: npu:Npun_R5202 2.5e-06 lysyl-tRNA synthetase K04567; Psort location: Cytoplasmic, score: 8.96.
  
     0.674
EKF01818.1
DNA sulfur modification protein DndE; KEGG: osa:4327345 0.59 Os01g0199900; hypothetical protein; K11808 phosphoribosylaminoimidazole carboxylase.
  
     0.616
EKF01815.1
RecF/RecN/SMC protein; KEGG: dan:Dana_GF11892 4.5e-10 GF11892 gene product from transcript GF11892-RA; K10866 DNA repair protein RAD50; Psort location: Cytoplasmic, score: 8.96.
  
     0.593
EKE96905.1
Hypothetical protein; KEGG: rxy:Rxyl_0726 0.97 histidinol phosphate aminotransferase K00817.
  
     0.554
EKF04666.1
Hypothetical protein; KEGG: scl:sce8490 2.8e-08 putative dehydrogenase/GMP reductase.
  
     0.538
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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