Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKF03730.1DNA adenine methylase; KEGG: npu:Npun_F2473 2.7e-103 D12 class N6 adenine-specific DNA methyltransferase K06223; Psort location: Cytoplasmic, score: 8.96. (305 aa)    
Predicted Functional Partners:
EKF01259.1
DNA-binding protein; KEGG: cag:Cagg_2238 2.7e-110 DNA methylase N-4/N-6 domain protein; K07319 putative adenine-specific DNA-methyltransferase; Psort location: Cytoplasmic, score: 8.96; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.670
EKF02750.1
Site-specific deoxyribonuclease; KEGG: ava:Ava_3014 3.9e-141 DNA methylase N-4/N-6 K00590; Psort location: Cytoplasmic, score: 8.96; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.466
ndhD
Proton-translocating NADH-quinone oxidoreductase, chain M; NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4 family.
       0.448
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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