STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03662.1Aminotransferase; KEGG: noc:Noc_1315 6.9e-89 aminotransferase, class V K03430; Psort location: Cytoplasmic, score: 9.97. (369 aa)    
Predicted Functional Partners:
EKF03661.1
Phosphonopyruvate decarboxylase; KEGG: bur:Bcep18194_B1915 5.3e-98 thiamine pyrophosphate enzyme, putative 3-phosphonopyruvate decarboxylase K06034.
 
  
  0.990
EKF03660.1
KEGG: noc:Noc_1317 2.0e-146 phosphoenolpyruvate phosphomutase K01841.
 
  
 0.954
EKF03664.1
Cytidyltransferase domain protein; KEGG: ddi:DDB_0191331 9.3e-28 pctA; cytidylyltransferase domain-containing protein; K00967 ethanolamine-phosphate cytidylyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.792
EKF03663.1
Putative SAM-dependent methyltransferase; KEGG: afu:AF0512 2.9e-10 chloroplast inner envelope membrane protein; K03183 ubiquinone/menaquinone biosynthesis methyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.757
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
  
 0.731
purD
KEGG: npu:Npun_F2438 1.4e-193 phosphoribosylamine--glycine ligase K01945; Psort location: Cytoplasmic, score: 8.96; Belongs to the GARS family.
  
    0.713
EKF03541.1
KEGG: npu:Npun_R5588 4.1e-194 IMP dehydrogenase family protein K00088; Psort location: Cytoplasmic, score: 8.96.
  
 0.643
fni
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
   
 0.608
EKF04874.1
KEGG: npu:Npun_R5717 7.4e-156 FMN-dependent alpha-hydroxy acid dehydrogenase.
   
 0.608
EKE96799.1
Transposase; KEGG: dre:445279 0.79 harbi1; harbinger transposase derived 1; Psort location: Cytoplasmic, score: 8.96.
   
 0.608
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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