STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF03678.1N-acetylmuramoyl-L-alanine amidase; KEGG: npu:Npun_R6032 6.4e-244 cell wall hydrolase/autolysin K01448. (584 aa)    
Predicted Functional Partners:
EKF06105.1
Hypothetical protein; KEGG: eci:UTI89_C1705 5.3e-59 yddW; lipoprotein YddW precursor.
 
   
  0.826
EKF05336.1
Transglycosylase SLT domain protein; KEGG: npu:Npun_R5647 0. lytic transglycosylase, catalytic; K08309 soluble lytic murein transglycosylase.
 
  
 0.783
EKF04953.1
KEGG: eci:UTI89_C1705 2.6e-57 yddW; lipoprotein YddW precursor.
 
   
  0.753
EKF02007.1
N-acetylmuramoyl-L-alanine amidase; KEGG: npu:Npun_R2674 1.8e-136 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase.
  
  
  0.743
EKF02586.1
KEGG: cya:CYA_1911 2.0e-43 S54 family peptidase K01362.
   
   0.740
EKF01429.1
KEGG: cya:CYA_1911 3.4e-87 S54 family peptidase K01362; Psort location: CytoplasmicMembrane, score: 10.00.
   
   0.740
EKF01430.1
KEGG: cya:CYA_1911 1.2e-66 S54 family peptidase K01362; Psort location: CytoplasmicMembrane, score: 10.00.
   
   0.740
EKF01135.1
Hypothetical protein; KEGG: dgr:Dgri_GH16034 0.0015 GH16034 gene product from transcript GH16034-RA; K11423 histone-lysine N-methyltransferase SETD2; Psort location: Cytoplasmic, score: 8.96.
  
     0.694
EKF05018.1
N-acetylmuramoyl-L-alanine amidase; KEGG: ava:Ava_1465 1.9e-203 cell wall hydrolase/autolysin K01448.
  
  
 
0.687
EKF05016.1
KEGG: ana:alr0093 6.3e-237 N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase.
  
  
 
0.686
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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