STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03484.1HAS barrel domain protein; KEGG: rxy:Rxyl_2982 0.71 multi-sensor signal transduction histidine kinase; Psort location: Cytoplasmic, score: 8.96. (218 aa)    
Predicted Functional Partners:
EKF05128.1
Putative nuclease NurA; KEGG: afr:AFE_1258 0.9995 DNA topoisomerase domain protein; K03169 DNA topoisomerase III.
 
     0.802
EKF02412.1
HAS barrel domain protein; KEGG: pcu:pc0362 0.98 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627; Psort location: Cytoplasmic, score: 8.96.
 
     0.789
EKE99404.1
Exonuclease SbcC; KEGG: eci:UTI89_C0417 4.7e-41 sbcC; exonuclease subunit SbcC K03546; Psort location: Cytoplasmic, score: 9.97.
 
     0.782
sbcD
DNA repair exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
 
     0.776
EKF04011.1
Transglutaminase-like family protein; KEGG: esi:Exig_2078 0.89 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566; Psort location: Cytoplasmic, score: 8.96.
  
     0.766
EKF00124.1
Hypothetical protein; KEGG: cag:Cagg_0115 2.1e-05 serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: OuterMembrane, score: 9.49.
  
     0.718
EKF02358.1
Phycobilisome linker protein ApcE; KEGG: cak:Caul_4567 0.96 truA; tRNA pseudouridine synthase A K06173; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the phycobilisome linker protein family.
  
     0.701
EKF03796.1
Hypothetical protein; KEGG: dme:Dmel_CG11430 0.65 olf186-F; CG11430 gene product from transcript CG11430-RB.
  
     0.673
EKF04849.1
Hypothetical protein; KEGG: cce:Ccel_0577 0.99 diacylglycerol kinase; K00901 diacylglycerol kinase.
  
     0.657
EKF02989.1
Tetratricopeptide repeat protein; KEGG: hpp:HPP12_0003 0.15 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase).
  
     0.650
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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