STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03536.1Putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: npu:Npun_R2557 1.7e-188 peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259; Psort location: CytoplasmicMembrane, score: 9.82. (440 aa)    
Predicted Functional Partners:
EKF00107.1
KEGG: npu:Npun_R1733 3.9e-189 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259; Psort location: Periplasmic, score: 9.76.
  
     0.769
EKE96917.1
Aldose 1-epimerase; KEGG: reh:H16_A2863 4.9e-24 galM; aldose 1-epimerase K01785.
  
    0.662
EKF05218.1
KEGG: tet:TTHERM_00624920 0.27 Protein kinase domain containing protein K08282.
  
     0.651
EKF04289.1
Ankyrin repeat protein; KEGG: bbt:BBta_2170 2.7e-32 putative thiosulfate sulfurtransferase K01010.
 
 
   0.633
EKF00782.1
Ankyrin repeat protein; KEGG: mdo:100023689 7.3e-24 similar to 2-5A-dependent RNase; K01165 ribonuclease L; Psort location: Cytoplasmic, score: 8.96.
 
 
   0.633
EKF01396.1
Ankyrin repeat protein; KEGG: xtr:100170182 2.9e-18 mib1; mindbomb homolog 1; K10645 E3 ubiquitin-protein ligase mind-bomb.
 
 
   0.630
EKF00188.1
KEGG: xla:403362 0.098 hypothetical protein MGC69056; K08887 proto-oncogene tyrosine-protein kinase ABL2.
 
     0.630
EKF05299.1
Hypothetical protein; KEGG: car:cauri_0030 5.1e-05 pknA; serine/threonine protein kinase PknA K08884.
  
     0.622
EKF06125.1
Kinase domain protein; KEGG: ava:Ava_1816 6.0e-51 serine/threonine protein kinase K00908; Psort location: CytoplasmicMembrane, score: 9.82.
   
   0.584
EKF05962.1
Ankyrin repeat protein; KEGG: dre:100170831 1.5e-30 ankk1; ankyrin repeat and kinase domain containing 1.
   
   0.583
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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