STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03540.1Thioredoxin; KEGG: ava:Ava_2654 1.0e-48 thioredoxin K03671; Psort location: Cytoplasmic, score: 9.26; Belongs to the thioredoxin family. (107 aa)    
Predicted Functional Partners:
EKF01660.1
Antioxidant, AhpC/TSA family; KEGG: ava:Ava_1358 3.0e-111 1-Cys peroxiredoxin K03386; Psort location: Cytoplasmic, score: 9.26.
   
 
 0.861
EKF02564.1
Glutaredoxin; KEGG: cyp:PCC8801_0474 1.0e-103 glutaredoxin-family domain protein.
   
 
 0.840
EKE99490.1
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
    
 
 0.827
tuf
Elongation factor EF1A; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 
 0.813
rpsC
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
    
   0.810
EKF05079.1
GMP synthase; KEGG: ava:Ava_1294 0. glutamate synthase (ferredoxin) K00284.
    
 
 0.788
EKF01451.1
KEGG: ava:Ava_2318 6.6e-171 glyceraldehyde-3-phosphate dehydrogenase K00150; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.761
EKF03670.1
KEGG: npu:Npun_R0672 1.2e-226 thioredoxin reductase K00384; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.760
EKF03025.1
KEGG: npu:Npun_F2752 2.4e-173 phosphoribulokinase/uridine kinase K00855; Psort location: Cytoplasmic, score: 9.97.
    
 
 0.750
cbbL
Ribulose bisphosphate carboxylase large chain protein; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
    
 
 0.743
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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