STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03554.1Hypothetical protein; KEGG: ftn:FTN_0812 0.23 bioD; dethiobiotin synthetase; K01935 dethiobiotin synthetase. (348 aa)    
Predicted Functional Partners:
EKF03553.1
KEGG: npu:Npun_R6604 5.6e-158 mandelate racemase/muconate lactonizing protein.
  
  0.997
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
     
  0.900
glsA
Glutaminase; KEGG: npu:Npun_F3815 2.9e-122 glutaminase K01425; Belongs to the glutaminase family.
     
  0.900
glsA-2
Glutaminase; KEGG: ana:all2934 1.0e-151 hypothetical protein; K01425 glutaminase; Psort location: Cytoplasmic, score: 8.96.
     
  0.900
purQ
Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]
     
  0.900
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
     
  0.900
EKF03552.1
Hydrolase, NUDIX family; KEGG: drm:Dred_1901 2.7e-23 NUDIX hydrolase; K01515 ADP-ribose pyrophosphatase; Psort location: Cytoplasmic, score: 8.96.
       0.529
EKF03555.1
Hypothetical protein; KEGG: pmi:PMT9312_0779 0.994 6-phosphogluconolactonase K01057.
       0.472
EKF02717.1
Hypothetical protein; KEGG: pac:PPA1318 0.077 NADH pyrophosphatase; K03426 NAD+ diphosphatase.
  
     0.442
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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