STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03555.1Hypothetical protein; KEGG: pmi:PMT9312_0779 0.994 6-phosphogluconolactonase K01057. (39 aa)    
Predicted Functional Partners:
EKF03553.1
KEGG: npu:Npun_R6604 5.6e-158 mandelate racemase/muconate lactonizing protein.
       0.472
EKF03554.1
Hypothetical protein; KEGG: ftn:FTN_0812 0.23 bioD; dethiobiotin synthetase; K01935 dethiobiotin synthetase.
       0.472
EKF03556.1
HNH endonuclease; KEGG: pub:SAR11_0418 7.0e-09 mcrA; 5-methylcytosine-specific restriction enzyme A K01157.
       0.423
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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