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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF03583.1Transposase; KEGG: stp:Strop_3152 0.997 RNA polymerase factor sigma-70 K03088; Psort location: Cytoplasmic, score: 8.96. (250 aa)    
Predicted Functional Partners:
EKF03230.1
Hypothetical protein; KEGG: hac:Hac_0006 0.28 recG; ATP-dependent DNA helicase RecG K03655; Psort location: Cytoplasmic, score: 8.96.
  
     0.554
EKF01382.1
Hypothetical protein; KEGG: mfe:Mefer_0896 0.22 DNA methylase N-4/N-6 domain protein; K07319 putative adenine-specific DNA-methyltransferase.
  
     0.453
EKF03273.1
KEGG: bra:BRADO5577 0.021 putative acetyltransferase family protein;K00657.
  
     0.419
EKF01191.1
Hopene-associated glycosyltransferase HpnB; KEGG: bpd:BURPS668_A3051 5.8e-92 glycosyl transferase, group 2 family protein K00754; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.413
EKE97321.1
Transposase; KEGG: hac:Hac_0006 0.995 recG; ATP-dependent DNA helicase RecG K03655; Psort location: Cytoplasmic, score: 8.96.
  
     0.405
EKE97243.1
Hypothetical protein; KEGG: tan:TA18040 0.36 DNA-directed RNA polymerase iii K03021.
  
     0.400
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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